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Percona Server install prompt "Error in my_thread_global_end():1 threads didn't exit"

chenzhe07chenzhe07 EntrantCurrent User Role Beginner
I'm trying to use the latest Percona Server MySQL (binary tarball) for my bussniess, but the following message prompt when I use mysql_install_db script to install database:
Installing MySQL system tables...
Error in my_thread_global_end(): 1 threads didn't exit
Filling help tables...
Error in my_thread_global_end(): 1 threads didn't exit
but I can start and update the instance , then i tried to use the version from Percona-Server-5.5.36 to Percona-Server-5.5.39, have the same problem.
It seems the error message ocurred in line 403:
402 s_echo "Installing MySQL system tables..."
403 if { echo "use mysql;"; cat $create_system_tables $fill_system_tables; } | eval "$filter_cmd_line" | $mysqld_install_cmd_line > /dev/null
404 then
the configure file my.cnf looks like so:

syslog-tag = 3306


# node specific settings
server-id = 1

# chain specific settings
port = 3306
datadir = /web/node3306/data
pid-file = /web/node3306/data/
socket = /web/node3306/data/3306.scok

# common InnoDB/XtraDB settings
innodb_buffer_pool_size = 2096M
innodb_log_file_size = 64M
innodb_log_buffer_size = 4M
innodb_flush_log_at_trx_commit = 2
innodb_flush_method = O_DIRECT
innodb_file_per_table = 1
default-storage-engine = innodb

user = mysql
skip-external-locking # a.k.a. skip-locking
character-set-server = utf8
log-bin = mysql-bin.log
The system environment as follows:
Release | CentOS release 6.3 (Final)
Kernel | 2.6.32-279.el6.x86_64
Architecture | CPU = 64-bit, OS = 64-bit
Threading | NPTL 2.12
SELinux | Enforcing

Release | CentOS Linux release 7.0.1406 (Core)
Kernel | 3.10.0-123.el7.x86_64
Architecture | CPU = 64-bit, OS = 64-bit
Threading | NPTL 2.17
SELinux | Disabled
and I export the path in .bash_profile file:

It makes me very confused at what I'm doing wrong, Can someone help me? Thanks a lot.
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